Publications & Manuscripts

† Equal contribution  •  ★ Senior author  •  Google Scholar profile →

2026
Turning Heterogeneity of Statistical Epistasis Networks to an Advantage
D Duroux, F Melograna, H Climente-González, B Fan, A Walakira, E E Gervasoni, Z Li, D Roqueiro, F Stella, K Van Steen
Briefings in Bioinformatics
Real-World EHR-Derived Progression-Free Survival Across Successive Lines of Therapy Informs Metastatic Breast Cancer Risk Stratification
X Zhao, T Niederhauser, Z Balazs, A Wicki, B Fan★, M Krauthammer
medRxiv (preprint) ★ Senior author
2025
Enhancing Post-Kidney Transplant Prognostication: An Interpretable Machine Learning Approach for Longitudinal Outcome Prediction
B Fan et al.
npj Digital Medicine
Joint Representation Learning for Oncology Applications
T Nandan, B Fan et al.
OUP Bioinformatics
Deep Learning Uncovers Sequence-Specific Amplification Bias in Multi-Template PCR
A Gimpel†, B Fan† et al.
Nature Communications
Detecting Genetic Interactions with Visible Neural Networks
A van Hilten†, F Melograna†, B Fan et al.
Communications Biology
2024
An Empirical Study on KDIGO-Defined Acute Kidney Injury Prediction in the Intensive Care Unit
X Lyu†, B Fan†, M Hüser† et al.
OUP Bioinformatics
Persistent Complement Dysregulation with Signs of Thromboinflammation in Active Long Covid
C Cervia-Hasler, S C Brüningk, T Hoch, B Fan et al.
Science
2023
Unsupervised Manifold Alignment with Joint Multidimensional Scaling
D Chen†, B Fan† et al.
ICLR 2023
2022
Prediction of Recovery from Multiple Organ Dysfunction Syndrome in Pediatric Sepsis Patients
B Fan et al.
OUP Bioinformatics (ISMB)
2020
Machine-Learning-Based Approach for Predicting Postoperative Skeletal Changes for Orthognathic Surgical Planning
Q Ma, E Kobayashi, B Fan et al.
Int J Med Robotics & Computer Assisted Surgery
Automatic 3D Landmarking Model Using Patch-Based Deep Neural Networks for CT Image of Oral and Maxillofacial Surgery
Q Ma, E Kobayashi, B Fan et al.
Int J Med Robotics & Computer Assisted Surgery
2019
Attention-Guided Decoder in Dilated Residual Network for Accurate Aortic Valve Segmentation in 3D CT Scans
B Fan, N Tomii, H Tsukihara, E Maeda, H Yamauchi, K Nawata, A Hatano, S Takagi, I Sakuma, M Ono
MICCAI Workshop 2019